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データセットの情報

For DIURNAL gene expression data, we calculated the Phase of each data by non-linear best fit to a sine wave with a 24 hour period, and similarly calculated the Amplitude. Visually checking the 1000 largest amplitude genes showed a good fit in all cases, though a few genes clearly deviated from sinusoidal behavior. All had a major period of 24 hours.

Reference
http://www.ncbi.nlm.nih.gov/pubmed/18419293

Descriptions for each data table:
diurnal_COL_LDHH The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
diurnal_COL_SD The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
diurnal_DD_DDHC The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
diurnal_LDHC The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
diurnal_LDHH_SM The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
diurnal_LDHH_ST The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
diurnal_LER_SD The data are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
diurnal_LIGHT5_HIF138_13 The data are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
diurnal_LIGHT5_HIF138_8 The data are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
diurnal_LIGHT5_znknOX The data are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
diurnal_LL12_LDHH The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
diurnal_LL23_LDHH The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
diurnal_LLHC The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
diurnal_LL_LDHC The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
diurnal_LL_LLHC The data are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
diurnal_lhyox_SD The data are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
diurnal_longday The data are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
diurnal_lux_2_LDHH The data are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
diurnal_phyB9_SD The data are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
diurnal_shortday The data are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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ファイル名
diurnal_COL_LDHH
テーブルデータ (テキスト)
2012.12.27
4.4MB
テーブルデータ (Excel)
2012.12.27
11.1MB
RDF (Turtle)
2012.12.27
41.2MB
diurnal_COL_SD
テーブルデータ (テキスト)
2012.12.28
4.3MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.1MB
diurnal_DD_DDHC
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_LDHC
テーブルデータ (テキスト)
2012.12.28
4.3MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.1MB
diurnal_LDHH_SM
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_LDHH_ST
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_LER_SD
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.1MB
diurnal_LIGHT5_HIF138_13
テーブルデータ (テキスト)
2012.12.28
4.6MB
テーブルデータ (Excel)
2012.12.28
9.8MB
RDF (Turtle)
2012.12.28
41.3MB
diurnal_LIGHT5_HIF138_8
テーブルデータ (テキスト)
2012.12.28
4.5MB
テーブルデータ (Excel)
2012.12.28
9.8MB
RDF (Turtle)
2012.12.28
41.3MB
diurnal_LIGHT5_znknOX
テーブルデータ (テキスト)
2012.12.28
4.5MB
テーブルデータ (Excel)
2012.12.28
9.8MB
RDF (Turtle)
2012.12.28
41.3MB
diurnal_LL12_LDHH
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_LL23_LDHH
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_LLHC
テーブルデータ (テキスト)
2012.12.28
4.3MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.1MB
diurnal_LL_LDHC
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_LL_LLHC
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_lhyox_SD
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_longday
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_lux_2_LDHH
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_phyB9_SD
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
diurnal_shortday
テーブルデータ (テキスト)
2012.12.28
4.4MB
テーブルデータ (Excel)
2012.12.28
11.1MB
RDF (Turtle)
2012.12.28
41.2MB
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データのリファレンス
合計ダウンロード数 545回
最初に登録した日 2012年12月27日
最後に更新した日 2013年1月15日

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