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データセットの情報

Developmental Coexpression (AtGenExpress + ATTED-II promoter motif) Full

Developmental Microarray Expression Data (AtGenExpress) of plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II). We took the median of triplicate measurements from AtGenExpress, then sorted the developmental series into plant organs (Flower, Leaf, Root, Stem, Fruit & Seeds), with one category for seedlings (8 days old or less) and another for whole plants (older than 8 days). Gene Loci without expression data or motif data were removed from this database.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101


Descriptions for each data table:
AtGenExpress_ATTED_Flowering
This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds
This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf
This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root
This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling
This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem
This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant
This collection of Gene Expression Properties are associated with whole plant body parts.
Heptamer_elements A list of the 7mer sequence motifs from ATTED-II. This table lists each 7mer along with the calculated CEG value and the position from the TSS of the maximum CEG value.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.en
#file_name AtGenExpress_ATTED_Seedling
#download_from http://linkdata.org/work/rdf1s328i
#namespace ATTED http://atted.jp/data/locus/
#namespace Flowering http://linkdata.org/work/rdf1s220i/Flowering.html#
#namespace Fruit_Seeds http://linkdata.org/work/rdf1s220i/Fruit_Seeds.html#
#namespace HeptamerElement http://linkdata.org/work/rdf1s328i/Heptamer_elements.html#
#namespace Leaf http://linkdata.org/work/rdf1s220i/Leaf.html#
#namespace Root http://linkdata.org/work/rdf1s220i/Root.html#
#namespace Seedling http://linkdata.org/work/rdf1s220i/Seedling.html#
#namespace Stem http://linkdata.org/work/rdf1s220i/Stem.html#
#namespace Whole_Plant http://linkdata.org/work/rdf1s220i/Whole_Plant.html#
#property motif position motif motif sequence CEG label:Col-0_cotyl label:Col-0_hyp label:Col-0_root7 label:Col-0_veg_leaf label:Col-0_leaf_1-2 label:Col-0_shoot_veg label:Col-0_seedl_green label:Col-0_roset7 label:Col-0_seedl_GM label:Col-0_seedl_GM5 label:Col-0_sedlGM-21 label:Col-0_sedlGM5-21
#object_type_xsd float string string float float float float float float float float float float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At1g01030.html 52 | 54 | 56 | 91 HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:ATGGGCC TCTCTCT | TCTCTCT | TCTCTCT | ATGGGCC 0.06 | 0.07 | 0.06 | 0.08 0.2052 -0.7952 -0.3856 0.1725 0.3086 -0.3145 0.6723 0.9026 0.3016 -0.0037 -0.3586 -0.1585
ATTED:At1g01050.html 34 HeptamerElement:ATATAAA ATATAAA 0.08 0.2238 0.5501 0.5572 -0.1136 0.1159 0.0603 -0.0618 -0.2068 -0.3255 -0.1494 -0.3127 -0.4025
ATTED:At1g01060.html 107 | 108 | 109 HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG ACGTGTC | CACGTGT | CCACGTG 0.09 | 0.10 | 0.07 0.6518 0.5358 -1.6986 0.3098 0.4303 -0.0006 0.5222 -1.3208 0.3958 0.1716 -0.4340 -0.1226
ATTED:At1g01070.html 30 | 31 | 100 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT ATAAATA | TATAAAT | AAAATAT 0.08 | 0.10 | 0.07 1.2186 2.9508 1.4143 0.8825 -1.4805 2.5616 0.3511 -1.4593 -0.7431 0.4219 -0.1003 0.6145
ATTED:At1g01080.html 98 | 99 HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC ATGGGCC | AATGGGC 0.08 | 0.09 1.0692 -0.3859 -2.1397 1.1023 1.5153 0.5241 1.5763 1.1930 0.6047 0.7426 0.2219 0.0543
ATTED:At1g01090.html 35 | 36 | 37 | 38 HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAA | ATATATA | TATATAT | ATATATA 0.11 | 0.10 | 0.10 | 0.10 -0.2086 0.1468 0.1308 0.3141 0.3664 0.2735 0.3593 0.2553 0.2911 0.0279 -0.2283 -0.1228
ATTED:At1g01100.html 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 -0.9975 0.4511 0.6782 0.6558 -0.0618 0.8179 -0.1359 0.0971 -0.3023 -0.1836 -0.4047 -0.3100
ATTED:At1g01110.html 40 | 41 | 42 | 80 | 81 | 85 | 143 HeptamerElement:CTATAAA | HeptamerElement:TCTATAA | HeptamerElement:GTCTATA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | HeptamerElement:TTGACTT | HeptamerElement:GATATTT CTATAAA | TCTATAA | GTCTATA | TTCTAGA | CTTCTAG | TTGACTT | GATATTT 0.09 | 0.06 | 0.06 | 0.10 | 0.08 | 0.09 | 0.08 -1.0869 -0.3027 0.6413 -0.4794 -0.8376 0.0327 -0.4010 -0.7467 -0.6911 -0.5917 -0.5091 -0.4404
ATTED:At1g01130.html 40 | 41 | 90 HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT AAGCCCA | AAAGCCC | GCCCAAT 0.07 | 0.06 | 0.07 -0.3968 -0.3534 -0.5975 -0.1474 -0.2292 -0.1979 -0.7773 -0.4733 -0.4295 -0.3475 0.4964 0.1197
ATTED:At1g01140.html 78 | 113 HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA ACGTGGC | ACGCGGA 0.07 | 0.07 1.3851 -1.3812 -4.5903 -0.4222 0.8240 -1.7461 -0.1926 0.0709 0.9553 0.8568 1.0588 1.6857
ATTED:At1g01150.html 42 | 43 HeptamerElement:AAACCCT | HeptamerElement:TAAACCC AAACCCT | TAAACCC 0.14 | 0.10 -0.0088 -0.0529 -0.0995 -0.0483 -0.0883 0.0233 0.0020 0.0140 -0.1045 -0.1152 -0.1371 -0.0959
ATTED:At1g01160.html 105 | 133 | 151 HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT GGCCCAA | AGGCCCA | GGGCCTT 0.07 | 0.07 | 0.06 -0.6155 -0.1943 0.1980 0.3514 -0.5198 0.7989 -0.4112 -0.4094 -0.3450 -0.4360 -0.1813 -0.2086
ATTED:At1g01170.html 29 | 30 | 49 | 75 HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT GATAAGA | AGATAAG | TTATCCA | GCCCATT 0.06 | 0.06 | 0.09 | 0.10 0.5682 0.4152 -3.3837 0.2772 0.4541 0.1221 -0.1448 0.3510 0.7467 0.6688 0.8502 0.8634
ATTED:At1g01200.html 38 HeptamerElement:ATATAAA ATATAAA 0.08 -0.0271 1.0269 1.1921 0.2190 0.1934 0.3603 0.1120 -0.0593 -0.4360 -0.1938 -0.1555 -0.0925
ATTED:At1g01220.html 43 | 108 | 109 | 110 HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT CTCCAGA | TGACTTT | TTGACTT | TTTGACT 0.06 | 0.06 | 0.07 | 0.07 0.2300 0.3182 -0.0528 0.1895 0.5743 0.1662 1.1864 0.4960 -0.1761 0.0525 -0.4613 -0.1860
ATTED:At1g01225.html 95 HeptamerElement:TCTCTAG TCTCTAG 0.06 -0.8449 0.4604 0.5306 0.0026 -0.3123 0.0822 -0.3553 -0.1595 -0.6307 -0.6291 -0.8491 -1.0032
ATTED:At1g01230.html 67 HeptamerElement:AAATATC AAATATC 0.13 0.2033 0.0799 0.4606 -0.4174 -0.1759 -0.5549 -0.9846 -0.2793 0.1291 -0.0176 -0.1406 -0.2129
ATTED:At1g01240.html 89 | 104 | 105 HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CAGCTGT | CACGTGT | ACACGTG 0.07 | 0.11 | 0.10 0.3673 -0.1755 -0.2395 -0.8409 0.0212 -1.1673 -1.2863 -0.0016 0.1785 0.1051 0.3558 0.5447
ATTED:At1g01280.html 39 HeptamerElement:TATATAT TATATAT 0.10 -0.3931 -0.4533 -0.5265 -0.3899 -0.2960 -0.4837 -0.2567 -0.3231 -0.3614 -0.4048 -0.3033 -0.2853
ATTED:At1g01290.html 32 HeptamerElement:AACCCTA AACCCTA 0.13 -0.1906 0.1323 0.2326 -0.0810 -0.2272 0.1871 -0.2060 -0.2337 -0.2716 -0.3159 -0.5284 -0.1901
ATTED:At1g01300.html 41 | 42 | 90 HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA GATATTT | AGATATT | TTATCCA 0.10 | 0.10 | 0.06 -1.0237 1.0394 0.2747 0.2906 -0.9500 0.8093 -0.1940 -0.1791 -0.7846 -0.4839 -0.8270 -0.7450
ATTED:At1g01310.html 52 | 53 | 54 | 60 | 61 HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA 0.06 | 0.07 | 0.06 | 0.06 | 0.07 -0.3363 -0.4964 -0.4766 -0.6124 -0.3440 -0.4899 -0.6265 -0.6124 -0.6145 -0.3920 -0.5226 -0.4239
ATTED:At1g01320.html 49 HeptamerElement:AGATATT AGATATT 0.10 0.6596 -0.7567 -3.7898 1.3041 1.2066 0.9180 2.3077 0.9056 0.3617 0.6197 0.4295 0.5200
ATTED:At1g01430.html 76 | 117 | 149 HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT CATGCAA | CCGACAT | AATATCT 0.08 | 0.06 | 0.07 1.1730 0.9812 -0.0236 0.0235 0.6880 -0.2067 0.7758 1.0810 0.9766 1.3640 0.9472 0.6870
ATTED:At1g01440.html 44 | 45 | 46 | 47 HeptamerElement:ACCCTAG | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ACCCTAG | AACCCTA | AAACCCT | AAAACCC 0.08 | 0.13 | 0.13 | 0.08 0.0992 -0.4217 0.0664 -0.1190 0.0131 -0.2845 0.2107 0.0166 0.5583 0.0900 0.4705 0.1208
ATTED:At1g01470.html 76 | 77 | 113 | 114 | 194 HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC 0.08 | 0.07 | 0.08 | 0.07 | 0.07 2.2388 1.1063 1.5642 -0.0259 0.3255 -0.5456 -0.4553 1.3021 0.9068 0.8476 0.7848 1.1514
ATTED:At1g01480.html 40 | 41 | 42 HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA ATATAAA | TATATAA | CTATATA 0.08 | 0.10 | 0.13 -0.2591 -0.3738 0.8227 -0.3408 -0.1291 -0.3887 -0.5426 -0.4800 -0.1645 -0.3902 -0.2123 -0.2287
ATTED:At1g01490.html 46 | 47 | 49 | 51 | 53 | 55 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT 0.07 | 0.07 | 0.07 | 0.06 | 0.06 | 0.07 0.3092 0.4481 -0.8204 -0.6717 -0.2141 -0.5623 -0.6239 -0.4695 0.7250 0.6979 0.7897 0.7078
ATTED:At1g01500.html 30 | 38 | 39 | 161 HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG AAACCCT | AATATCT | AAATATC | ACACGTG 0.14 | 0.11 | 0.11 | 0.08 -0.1113 -0.8032 -0.8365 -0.5267 -0.0010 -0.7727 -0.3042 0.5294 0.0078 -0.1732 -0.1862 -0.2226
ATTED:At1g01510.html 6 | 38 | 39 | 40 | 105 HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC 0.07 | 0.08 | 0.10 | 0.13 | 0.09 -0.7438 0.3862 0.5473 0.3712 -0.1365 0.6080 -0.0784 -0.1947 -0.2149 -0.2656 -0.1289 -0.1553
ATTED:At1g01520.html 151 | 152 HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CACGTGT | ACACGTG 0.08 | 0.08 0.1942 -0.2291 -0.4131 -0.2174 0.3768 -0.2810 0.3966 0.2362 0.1851 0.2465 -0.0889 0.3140
ATTED:At1g01540.html 5 | 66 | 71 HeptamerElement:TCACTCC | HeptamerElement:CATGCAA | HeptamerElement:CCACACA TCACTCC | CATGCAA | CCACACA 0.07 | 0.08 | 0.07 0.5045 -0.2813 -0.1237 0.0903 0.7259 -0.2071 0.2503 0.1033 0.4816 0.0874 0.7921 0.2014
ATTED:At1g01550.html 115 HeptamerElement:CGTCACA CGTCACA 0.06 0.0453 -0.0749 0.3586 -0.2832 -0.2718 -0.4362 -0.6623 -0.4647 0.5437 0.1495 0.5377 0.5153
ATTED:At1g01560.html 36 | 38 HeptamerElement:TAAACCC | HeptamerElement:TATAAAC TAAACCC | TATAAAC 0.10 | 0.07 1.3127 -0.7820 -0.9157 -1.3687 -0.7114 -1.5363 -1.3443 -1.2404 1.1855 0.1183 0.5302 1.5216
ATTED:At1g01600.html 27 | 28 | 29 HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA TATAAAT | CTATAAA | CCTATAA 0.10 | 0.09 | 0.07 -1.5469 -1.4216 -0.7879 1.4871 -1.8539 0.2405 0.1134 0.6925 -0.9546 -0.2491 -0.2581 0.5242
ATTED:At1g01610.html 11 | 30 | 31 HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC CTCTCTT | AAAACCC | TAAAACC 0.06 | 0.09 | 0.06 -0.3675 0.2487 -0.5661 0.3518 -0.0494 0.2032 0.2352 0.5154 0.3614 0.5817 0.1065 -0.1392
ATTED:At1g01620.html 67 HeptamerElement:TTATCCA TTATCCA 0.09 -0.0300 1.0108 1.2630 0.2891 0.0974 0.3763 -0.4310 0.2861 0.5229 0.2787 1.0140 0.8648
ATTED:At1g01630.html 97 | 98 | 99 | 100 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC 0.07 | 0.07 | 0.10 | 0.08 0.7199 -0.1024 0.1740 0.3713 0.2628 0.0615 0.1515 0.4397 -0.0631 0.4572 -0.1547 -0.3776
ATTED:At1g01650.html 95 | 96 | 118 HeptamerElement:GCCCAAA | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA GCCCAAA | AGCCCAA | AAGCCCA 0.06 | 0.07 | 0.07 -0.4625 -1.0596 0.0948 -0.3132 -0.6006 -0.4755 -0.6063 -0.6766 -0.1969 -0.3019 -0.1633 0.1223
ATTED:At1g01670.html 64 HeptamerElement:ACGTGTC ACGTGTC 0.10 -0.0803 -0.0854 0.2877 -0.1662 0.0431 -0.0296 -0.1927 -0.2127 -0.2991 -0.1979 0.0684 -0.0302
ATTED:At1g01710.html 41 HeptamerElement:ACACGTG ACACGTG 0.09 0.0263 0.0850 -0.4440 -0.1688 0.0755 -0.1571 -0.1131 0.0360 -0.2172 -0.2200 -0.2045 -0.2588
ATTED:At1g01720.html 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 114 HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:ACGTGTC TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | ACGTGTC 0.11 | 0.06 | 0.09 | 0.09 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.09 -0.8479 -0.5182 0.1124 -0.9296 -0.6950 -1.3759 -1.2359 -0.6437 0.7001 0.4416 0.3157 1.0728
ATTED:At1g01730.html 65 | 66 | 67 | 68 | 79 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC 0.07 | 0.08 | 0.11 | 0.08 | 0.08 -0.5197 0.2882 0.1527 -0.2693 -1.5580 0.0060 -0.9459 -0.7157 -0.2355 -0.4253 -0.2752 -0.1306
ATTED:At1g01740.html 30 HeptamerElement:ACCTTAT ACCTTAT 0.06 0.2881 0.4879 0.0898 0.2679 0.2160 0.3342 0.4295 0.1895 -0.1707 0.0169 0.0546 0.1177
ATTED:At1g01770.html 57 | 58 HeptamerElement:ATATATA | HeptamerElement:TATATAT ATATATA | TATATAT 0.09 | 0.09 0.2259 -0.1884 -1.1034 -0.1680 0.3868 -0.5275 0.3683 -0.0487 -0.0841 -0.0236 0.1898 0.2968
ATTED:At1g01790.html 11 HeptamerElement:CTCTCTT CTCTCTT 0.06 1.0068 -0.2351 -1.2876 0.2274 1.1453 -0.3219 1.8047 1.2405 0.6038 0.7128 0.4627 0.4706
ATTED:At1g01820.html 46 | 105 | 106 HeptamerElement:GCGTTCG | HeptamerElement:GATATTT | HeptamerElement:AGATATT GCGTTCG | GATATTT | AGATATT 0.07 | 0.09 | 0.09 -0.0575 0.0402 0.0370 -0.2396 -0.2800 -0.2108 -0.5542 -0.2526 0.2099 0.0985 0.5804 0.4535
ATTED:At1g01840.html 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 -0.3218 -0.3532 -0.4435 0.2008 0.0929 0.2714 0.1991 0.5484 -0.5360 -0.5082 -0.4413 -0.3555
ATTED:At1g01860.html 8 HeptamerElement:TCTTATC TCTTATC 0.08 0.3608 -0.5274 -0.5147 0.6765 0.7857 0.4221 0.7374 0.6762 -0.1583 -0.1390 -0.1839 -0.0827
ATTED:At1g01900.html 40 | 41 | 42 | 43 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAT | ATATATA | TATATAT | ATATATA 0.10 | 0.10 | 0.10 | 0.10 -1.3978 1.0217 -0.6033 0.3204 0.2702 -0.1773 0.6768 0.1734 -0.9328 -0.6665 -0.3141 0.1250
ATTED:At1g01920.html 18 | 19 | 38 | 88 | 89 | 98 | 99 | 100 HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA TAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA 0.09 | 0.07 | 0.09 | 0.10 | 0.06 | 0.07 | 0.08 | 0.09 -0.5612 0.0747 0.5418 0.2335 -0.2622 0.6330 -0.2373 -0.3804 -0.2041 -0.3003 -0.1465 -0.1730
ATTED:At1g01930.html 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 -0.2661 -0.3725 -0.1735 0.1599 0.1472 0.1615 0.3246 -0.1247 0.1448 -0.1165 -0.0455 -0.0512
ATTED:At1g01940.html 71 | 72 | 73 | 74 | 82 | 83 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 -0.8611 0.6446 0.9137 0.6658 -0.8289 1.1264 -0.4227 -0.1783 -0.2373 0.0002 -0.1683 -0.4021
ATTED:At1g01950.html 62 | 114 HeptamerElement:CTCTCTT | HeptamerElement:AAAATAT CTCTCTT | AAAATAT 0.06 | 0.07 -0.1783 -0.0016 0.1881 0.2202 -0.0677 0.3725 0.1995 -0.3928 0.2519 -0.1895 0.2358 0.0650
ATTED:At1g01970.html 65 | 81 | 82 | 83 | 84 | 99 | 100 | 101 | 121 | 122 HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC 0.06 | 0.07 | 0.10 | 0.11 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 0.2833 -0.6700 -1.6608 0.6043 0.9024 0.1201 1.7159 0.9416 0.1415 0.0879 -0.3231 -0.2677
ATTED:At1g01990.html 61 | 85 | 86 | 87 | 98 | 147 | 148 HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT 0.06 | 0.07 | 0.10 | 0.09 | 0.09 | 0.06 | 0.06 0.1417 -0.1777 -0.4562 -0.0606 -0.0759 0.1141 -0.1090 0.1739 0.5329 0.1205 0.5335 0.1849
ATTED:At1g02020.html 118 HeptamerElement:TGCCGAC TGCCGAC 0.08 0.1700 -0.5599 -0.9057 -0.3508 0.3665 -0.3778 0.3165 0.0953 -0.0135 -0.0271 0.1272 0.1095
ATTED:At1g02050.html 37 HeptamerElement:AATATCT AATATCT 0.11 -0.5594 -0.4093 -0.2593 -0.4051 -0.3139 -0.3173 -0.4123 -0.5470 -0.0469 -0.4723 0.2545 0.2170
ATTED:At1g02060.html 36 | 68 | 69 | 70 | 80 | 81 | 96 | 114 | 115 | 116 | 117 HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 -0.3045 0.0072 -0.0769 0.1755 -0.1725 0.3685 0.4098 -0.3182 0.0227 -0.0802 0.1652 0.0414
ATTED:At1g02070.html 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 -0.9534 -1.0719 -0.9148 -0.7568 -0.6217 -0.7345 -0.7166 -0.4405 -0.7307 -0.5106 -0.5534 -0.5549
ATTED:At1g02080.html 62 | 63 | 64 | 65 HeptamerElement:ACCCTAG | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ACCCTAG | AACCCTA | AAACCCT | AAAACCC 0.06 | 0.10 | 0.11 | 0.08 -0.4212 0.0110 0.1298 -0.1799 -0.5339 -0.0313 0.2668 -0.3036 -0.5121 -0.5023 -0.3831 -0.3648
ATTED:At1g02090.html 30 | 54 | 68 | 69 | 88 | 89 | 143 | 144 HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 -0.5478 -0.1970 0.2726 0.3633 -0.4105 0.6983 -0.3090 -0.1543 -0.3761 -0.5946 -0.7325 -0.6270
ATTED:At1g02100.html 86 | 87 | 106 | 107 | 108 HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG 0.07 | 0.08 | 0.10 | 0.10 | 0.08 -0.0467 0.0059 0.5360 -0.0433 -0.2287 0.0292 -0.2827 -0.3110 0.3601 -0.0052 0.5995 0.5089
ATTED:At1g02120.html 38 HeptamerElement:GGCCCAA GGCCCAA 0.07 0.1672 0.3952 -0.1026 -0.3961 -0.4894 -0.2491 0.0015 -0.1740 0.1920 0.0349 0.2593 0.5291
ATTED:At1g02130.html 45 | 46 | 47 | 72 | 73 | 74 HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 -0.1010 -0.1395 0.3384 -0.0222 0.0932 0.1711 -0.2826 0.0436 -0.1109 -0.2390 -0.1364 -0.1586
ATTED:At1g02140.html 58 | 59 | 60 | 61 | 72 | 73 | 106 | 107 | 192 HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 -0.4116 -0.1560 0.2894 0.1095 -0.2204 0.4025 -0.4010 -0.0746 -0.2072 -0.0938 -0.0765 -0.1664
ATTED:At1g02160.html 43 | 44 | 45 | 66 | 67 | 82 | 99 HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC 0.09 | 0.10 | 0.07 | 0.10 | 0.08 | 0.08 | 0.09 -0.3444 -0.0575 -0.0987 -0.2469 -0.5080 -0.0553 -1.0908 -0.4105 -0.3012 -0.2880 0.1578 -0.1641
ATTED:At1g02180.html 65 | 66 | 67 | 68 | 84 HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA 0.07 | 0.07 | 0.09 | 0.06 | 0.07 -0.7753 0.0050 -0.5693 0.5592 -0.1034 0.7879 -0.1730 0.0991 -0.8816 -0.6031 -0.8454 -0.8515
ATTED:At1g02190.html 32 | 33 | 34 | 35 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA TATATAA | CTATATA | TCTATAT | CTCTATA 0.11 | 0.13 | 0.10 | 0.10 -1.7334 -1.9025 -1.8913 -1.2968 -1.5731 -0.9803 -1.6726 -1.4746 -1.6579 -1.6051 -1.1379 -0.4650
ATTED:At1g02205.html 31 | 32 | 43 | 44 | 67 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA 0.11 | 0.13 | 0.07 | 0.08 | 0.06 -3.1508 -4.2120 -4.3884 0.8117 -0.4427 0.1120 -0.2043 0.1934 -2.0698 -1.3743 -0.2323 0.9793
ATTED:At1g02260.html 117 | 118 HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC CGTGGCA | ACGTGGC 0.08 | 0.09 -0.2047 -0.6943 0.0268 -0.3879 -0.4939 -0.2163 -0.3907 -0.4522 -0.5284 -0.4159 -0.2365 -0.2855
ATTED:At1g02270.html 125 | 126 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.09 | 0.09 0.7816 -0.2265 0.3475 -0.1356 0.4324 -0.3446 -0.1410 0.3963 0.4754 0.1218 0.5000 0.3123
ATTED:At1g02280.html 26 HeptamerElement:GATAAGG GATAAGG 0.07 -0.1095 -0.4755 -1.2347 1.5613 1.2562 1.2961 1.0799 0.8075 0.3814 0.2428 0.1179 -0.0854
ATTED:At1g02310.html 25 | 34 | 35 | 36 | 131 HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT 0.06 | 0.11 | 0.10 | 0.10 | 0.10 -0.6115 -1.0606 0.5184 -0.7461 -0.5064 -0.9368 -0.9018 -0.8337 -0.9473 -0.3792 -0.7113 0.3795
ATTED:At1g02330.html 38 | 53 | 55 | 127 | 128 | 147 HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT GGCCCAT | TGGGCTT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | 0.07 -0.8036 -0.0136 0.4006 0.3433 -0.5763 0.4814 -0.1996 -0.4820 -0.1885 -0.3886 -0.5138 -0.4858
ATTED:At1g02340.html 26 HeptamerElement:CCACACA CCACACA 0.06 -1.2798 -0.9144 -1.5202 -1.3100 -1.3221 -1.0266 -1.3792 -0.5393 -0.8517 -0.3960 1.0958 1.0376
ATTED:At1g02360.html 30 | 31 | 32 | 52 | 53 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT 0.11 | 0.13 | 0.10 | 0.10 | 0.07 1.1637 0.0853 2.6594 -0.5867 0.5413 -0.9459 -0.8126 -0.4546 3.8341 1.6319 0.9099 -0.2569
ATTED:At1g02370.html 58 | 59 | 60 | 61 HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC AACCCTA | AAACCCT | TAAACCC | TTAAACC 0.11 | 0.12 | 0.08 | 0.06 -0.9557 -0.1544 0.3748 0.5875 -0.6170 1.1311 0.2104 -0.0249 -0.8261 -0.5646 -0.5473 -0.8163
ATTED:At1g02390.html 28 | 71 | 122 | 172 | 173 | 180 HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC 0.11 | 0.14 | 0.07 | 0.10 | 0.06 | 0.07 1.6720 -0.7729 -0.2493 -0.2593 0.2960 -0.6555 -0.4716 0.3278 0.0979 0.3940 0.8770 1.2019
ATTED:At1g02400.html 137 HeptamerElement:AATAATT AATAATT 0.06 0.2159 -0.2108 2.2615 -0.2263 -0.1738 0.2374 -1.1629 -0.2438 3.3897 1.2906 1.9975 1.4874
ATTED:At1g02410.html 37 | 45 | 46 | 110 | 146 HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT 0.07 | 0.08 | 0.06 | 0.06 | 0.06 -0.1078 -0.1987 -0.3374 -0.0582 -0.0367 0.1198 -0.1798 -0.1386 -0.0663 -0.2790 -0.2813 -0.3974
※ 100行まで表示しています。