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データセットの情報

Developmental Coexpression (AtGenExpress + ATTED-II promoter motif) Full

Developmental Microarray Expression Data (AtGenExpress) of plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II). We took the median of triplicate measurements from AtGenExpress, then sorted the developmental series into plant organs (Flower, Leaf, Root, Stem, Fruit & Seeds), with one category for seedlings (8 days old or less) and another for whole plants (older than 8 days). Gene Loci without expression data or motif data were removed from this database.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101


Descriptions for each data table:
AtGenExpress_ATTED_Flowering
This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds
This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf
This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root
This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling
This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem
This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant
This collection of Gene Expression Properties are associated with whole plant body parts.
Heptamer_elements A list of the 7mer sequence motifs from ATTED-II. This table lists each 7mer along with the calculated CEG value and the position from the TSS of the maximum CEG value.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.en
#file_name AtGenExpress_ATTED_Root
#download_from http://linkdata.org/work/rdf1s328i
#namespace ATTED http://atted.jp/data/locus/
#namespace Flowering http://linkdata.org/work/rdf1s220i/Flowering.html#
#namespace Fruit_Seeds http://linkdata.org/work/rdf1s220i/Fruit_Seeds.html#
#namespace HeptamerElement http://linkdata.org/work/rdf1s328i/Heptamer_elements.html#
#namespace Leaf http://linkdata.org/work/rdf1s220i/Leaf.html#
#namespace Root http://linkdata.org/work/rdf1s220i/Root.html#
#namespace Seedling http://linkdata.org/work/rdf1s220i/Seedling.html#
#namespace Stem http://linkdata.org/work/rdf1s220i/Stem.html#
#namespace Whole_Plant http://linkdata.org/work/rdf1s220i/Whole_Plant.html#
#property motif position motif motif sequence CEG label:Col-0_root17 label:Col-0_root_MS1 label:Col-0_root_GM-8 label:Col-0_root_GM5-8 label:Col-0_root_GM-21 label:Col-0_root_GM5-21
#object_type_xsd float string string float float float float float float float
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
ATTED:At1g01030.html 52 | 54 | 56 | 91 HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:ATGGGCC TCTCTCT | TCTCTCT | TCTCTCT | ATGGGCC 0.06 | 0.07 | 0.06 | 0.08 -0.3543 -0.6718 -0.4085 -0.4842 -0.4288 -0.5069
ATTED:At1g01050.html 34 HeptamerElement:ATATAAA ATATAAA 0.08 0.6316 0.2989 0.0224 0.0813 -0.0985 0.0330
ATTED:At1g01060.html 107 | 108 | 109 HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG ACGTGTC | CACGTGT | CCACGTG 0.09 | 0.10 | 0.07 -1.2945 -0.8632 -0.8518 -0.8437 -0.7480 -0.7424
ATTED:At1g01070.html 30 | 31 | 100 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:AAAATAT ATAAATA | TATAAAT | AAAATAT 0.08 | 0.10 | 0.07 1.9119 1.7917 1.0242 1.3325 1.3963 1.8666
ATTED:At1g01080.html 98 | 99 HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC ATGGGCC | AATGGGC 0.08 | 0.09 -2.2719 -1.9903 -2.1833 -2.0330 -2.0553 -2.1519
ATTED:At1g01090.html 35 | 36 | 37 | 38 HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAA | ATATATA | TATATAT | ATATATA 0.11 | 0.10 | 0.10 | 0.10 0.0704 0.2057 0.0647 0.1510 -0.4651 -0.6235
ATTED:At1g01100.html 33 | 61 | 82 | 83 | 84 | 85 | 123 | 182 | 183 HeptamerElement:TATAAAC | HeptamerElement:GGCCCAT | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC | HeptamerElement:AGGCCCA | HeptamerElement:AAGTCAA | HeptamerElement:AAAGTCA TATAAAC | GGCCCAT | GGGCCTA | TGGGCCT | ATGGGCC | AATGGGC | AGGCCCA | AAGTCAA | AAAGTCA 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.09 | 0.08 | 0.07 | 0.07 0.6938 0.3742 0.0536 0.0612 0.1665 0.0640
ATTED:At1g01110.html 40 | 41 | 42 | 80 | 81 | 85 | 143 HeptamerElement:CTATAAA | HeptamerElement:TCTATAA | HeptamerElement:GTCTATA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG | HeptamerElement:TTGACTT | HeptamerElement:GATATTT CTATAAA | TCTATAA | GTCTATA | TTCTAGA | CTTCTAG | TTGACTT | GATATTT 0.09 | 0.06 | 0.06 | 0.10 | 0.08 | 0.09 | 0.08 0.2266 -0.2235 -0.1021 -0.1864 -0.5250 -0.5581
ATTED:At1g01130.html 40 | 41 | 90 HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCAAT AAGCCCA | AAAGCCC | GCCCAAT 0.07 | 0.06 | 0.07 -0.7697 -0.7630 -0.8314 -0.7422 -1.0648 -0.9618
ATTED:At1g01140.html 78 | 113 HeptamerElement:ACGTGGC | HeptamerElement:ACGCGGA ACGTGGC | ACGCGGA 0.07 | 0.07 -3.5983 -3.2126 -4.1932 -3.8473 -4.4004 -4.1450
ATTED:At1g01150.html 42 | 43 HeptamerElement:AAACCCT | HeptamerElement:TAAACCC AAACCCT | TAAACCC 0.14 | 0.10 -0.0751 0.0111 -0.0242 -0.0199 -0.0696 -0.0740
ATTED:At1g01160.html 105 | 133 | 151 HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:GGGCCTT GGCCCAA | AGGCCCA | GGGCCTT 0.07 | 0.07 | 0.06 -0.1529 -0.1242 -0.1632 -0.3854 -0.1361 -0.1996
ATTED:At1g01170.html 29 | 30 | 49 | 75 HeptamerElement:GATAAGA | HeptamerElement:AGATAAG | HeptamerElement:TTATCCA | HeptamerElement:GCCCATT GATAAGA | AGATAAG | TTATCCA | GCCCATT 0.06 | 0.06 | 0.09 | 0.10 -2.4883 -2.3121 -1.7107 -1.9609 -0.8098 -1.5417
ATTED:At1g01200.html 38 HeptamerElement:ATATAAA ATATAAA 0.08 0.8094 1.1559 0.5474 0.8744 0.5661 0.4771
ATTED:At1g01220.html 43 | 108 | 109 | 110 HeptamerElement:CTCCAGA | HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT CTCCAGA | TGACTTT | TTGACTT | TTTGACT 0.06 | 0.06 | 0.07 | 0.07 -0.0800 -0.2095 0.0089 0.2534 -0.1910 -0.1575
ATTED:At1g01225.html 95 HeptamerElement:TCTCTAG TCTCTAG 0.06 0.3888 0.4589 -0.0317 0.0783 -0.1277 -0.0210
ATTED:At1g01230.html 67 HeptamerElement:AAATATC AAATATC 0.13 0.4825 0.7461 0.3954 0.5556 0.2695 0.2987
ATTED:At1g01240.html 89 | 104 | 105 HeptamerElement:CAGCTGT | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CAGCTGT | CACGTGT | ACACGTG 0.07 | 0.11 | 0.10 -0.0771 -0.3315 -0.1793 -0.3043 0.0564 0.0371
ATTED:At1g01280.html 39 HeptamerElement:TATATAT TATATAT 0.10 -0.4483 -0.4105 -0.5033 -0.5225 -0.4999 -0.4712
ATTED:At1g01290.html 32 HeptamerElement:AACCCTA AACCCTA 0.13 0.1396 -0.2101 -0.1951 -0.2084 -0.3240 -0.2437
ATTED:At1g01300.html 41 | 42 | 90 HeptamerElement:GATATTT | HeptamerElement:AGATATT | HeptamerElement:TTATCCA GATATTT | AGATATT | TTATCCA 0.10 | 0.10 | 0.06 -0.3546 -0.3759 -0.7979 -0.5348 -1.1942 -1.3052
ATTED:At1g01310.html 52 | 53 | 54 | 60 | 61 HeptamerElement:TGACTTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:CATGCAT | HeptamerElement:CCATGCA TGACTTT | TTGACTT | TTTGACT | CATGCAT | CCATGCA 0.06 | 0.07 | 0.06 | 0.06 | 0.07 -0.5468 -0.5841 -0.5807 -0.6123 -0.5152 -0.6583
ATTED:At1g01320.html 49 HeptamerElement:AGATATT AGATATT 0.10 -3.9094 -4.0749 -2.5955 -3.4616 -3.0461 -3.5670
ATTED:At1g01430.html 76 | 117 | 149 HeptamerElement:CATGCAA | HeptamerElement:CCGACAT | HeptamerElement:AATATCT CATGCAA | CCGACAT | AATATCT 0.08 | 0.06 | 0.07 -0.1207 -0.1566 -0.0030 0.0593 -0.4728 -0.7608
ATTED:At1g01440.html 44 | 45 | 46 | 47 HeptamerElement:ACCCTAG | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ACCCTAG | AACCCTA | AAACCCT | AAAACCC 0.08 | 0.13 | 0.13 | 0.08 0.0710 -0.1244 0.5139 0.1064 0.5207 0.0981
ATTED:At1g01470.html 76 | 77 | 113 | 114 | 194 HeptamerElement:AAACCCT | HeptamerElement:AAAACCC | HeptamerElement:GACACGT | HeptamerElement:AGACACG | HeptamerElement:AAATATC AAACCCT | AAAACCC | GACACGT | AGACACG | AAATATC 0.08 | 0.07 | 0.08 | 0.07 | 0.07 1.6447 1.3346 1.1364 1.5480 1.0254 1.0872
ATTED:At1g01480.html 40 | 41 | 42 HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:CTATATA ATATAAA | TATATAA | CTATATA 0.08 | 0.10 | 0.13 0.3480 0.3566 0.0958 0.0984 -0.4070 -0.1168
ATTED:At1g01490.html 46 | 47 | 49 | 51 | 53 | 55 HeptamerElement:CTCTCTT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT | HeptamerElement:TCTCTCT CTCTCTT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT | TCTCTCT 0.07 | 0.07 | 0.07 | 0.06 | 0.06 | 0.07 -0.9010 0.1757 0.2832 0.4983 0.5044 0.3589
ATTED:At1g01500.html 30 | 38 | 39 | 161 HeptamerElement:AAACCCT | HeptamerElement:AATATCT | HeptamerElement:AAATATC | HeptamerElement:ACACGTG AAACCCT | AATATCT | AAATATC | ACACGTG 0.14 | 0.11 | 0.11 | 0.08 -0.6953 -0.1931 -0.2066 -0.3500 -0.1677 -0.3290
ATTED:At1g01510.html 6 | 38 | 39 | 40 | 105 HeptamerElement:TCACTCC | HeptamerElement:CCCTAAA | HeptamerElement:ACCCTAA | HeptamerElement:AACCCTA | HeptamerElement:TTGGGCC TCACTCC | CCCTAAA | ACCCTAA | AACCCTA | TTGGGCC 0.07 | 0.08 | 0.10 | 0.13 | 0.09 0.5348 0.0718 0.3241 0.1202 0.1647 0.0393
ATTED:At1g01520.html 151 | 152 HeptamerElement:CACGTGT | HeptamerElement:ACACGTG CACGTGT | ACACGTG 0.08 | 0.08 -0.2930 -0.2993 -0.3222 -0.3358 -0.2273 -0.2891
ATTED:At1g01540.html 5 | 66 | 71 HeptamerElement:TCACTCC | HeptamerElement:CATGCAA | HeptamerElement:CCACACA TCACTCC | CATGCAA | CCACACA 0.07 | 0.08 | 0.07 -0.4953 -0.6614 -0.6705 -0.6746 -0.7510 -0.7698
ATTED:At1g01550.html 115 HeptamerElement:CGTCACA CGTCACA 0.06 0.5405 0.2980 0.3693 0.1437 0.8952 0.8175
ATTED:At1g01560.html 36 | 38 HeptamerElement:TAAACCC | HeptamerElement:TATAAAC TAAACCC | TATAAAC 0.10 | 0.07 -0.8698 -0.4279 -1.5918 -1.1823 -1.0430 -0.9715
ATTED:At1g01600.html 27 | 28 | 29 HeptamerElement:TATAAAT | HeptamerElement:CTATAAA | HeptamerElement:CCTATAA TATAAAT | CTATAAA | CCTATAA 0.10 | 0.09 | 0.07 -1.0766 -0.0372 -1.0159 -0.8190 -1.2324 -1.0201
ATTED:At1g01610.html 11 | 30 | 31 HeptamerElement:CTCTCTT | HeptamerElement:AAAACCC | HeptamerElement:TAAAACC CTCTCTT | AAAACCC | TAAAACC 0.06 | 0.09 | 0.06 -1.1033 0.7221 0.7399 0.9396 -0.0112 -0.0530
ATTED:At1g01620.html 67 HeptamerElement:TTATCCA TTATCCA 0.09 1.4282 0.7399 1.1646 0.7890 1.0478 0.5288
ATTED:At1g01630.html 97 | 98 | 99 | 100 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC 0.07 | 0.07 | 0.10 | 0.08 0.0515 0.5644 0.3043 0.5458 0.1362 0.1879
ATTED:At1g01650.html 95 | 96 | 118 HeptamerElement:GCCCAAA | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA GCCCAAA | AGCCCAA | AAGCCCA 0.06 | 0.07 | 0.07 0.2069 -0.3238 -0.2252 -0.3360 -0.1112 -0.2699
ATTED:At1g01670.html 64 HeptamerElement:ACGTGTC ACGTGTC 0.10 0.2189 -0.0639 -0.1049 -0.1049 0.2454 0.2076
ATTED:At1g01710.html 41 HeptamerElement:ACACGTG ACACGTG 0.09 -0.5860 -0.5661 -0.4417 -0.2641 -0.2300 -0.1981
ATTED:At1g01720.html 27 | 46 | 47 | 48 | 49 | 50 | 80 | 81 | 89 | 90 | 114 HeptamerElement:TATATAA | HeptamerElement:CGTGTCC | HeptamerElement:ACGTGTC | HeptamerElement:CACGTGT | HeptamerElement:ACACGTG | HeptamerElement:GACACGT | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CACGTGT | HeptamerElement:CCACGTG | HeptamerElement:ACGTGTC TATATAA | CGTGTCC | ACGTGTC | CACGTGT | ACACGTG | GACACGT | TCTAGAA | TTCTAGA | CACGTGT | CCACGTG | ACGTGTC 0.11 | 0.06 | 0.09 | 0.09 | 0.09 | 0.08 | 0.14 | 0.10 | 0.11 | 0.07 | 0.09 1.1808 0.2783 0.6188 0.3055 0.8278 1.2113
ATTED:At1g01730.html 65 | 66 | 67 | 68 | 79 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:ATGGGCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | ATGGGCC 0.07 | 0.08 | 0.11 | 0.08 | 0.08 0.2115 0.0393 0.1597 -0.0077 0.4700 0.3957
ATTED:At1g01740.html 30 HeptamerElement:ACCTTAT ACCTTAT 0.06 0.0226 -0.2928 -0.2013 -0.0615 0.0576 -0.0858
ATTED:At1g01770.html 57 | 58 HeptamerElement:ATATATA | HeptamerElement:TATATAT ATATATA | TATATAT 0.09 | 0.09 -0.2934 -1.4476 0.2060 -0.5940 0.2819 0.0944
ATTED:At1g01790.html 11 HeptamerElement:CTCTCTT CTCTCTT 0.06 -1.2583 -1.5435 -1.2832 -1.3734 -1.4278 -1.5151
ATTED:At1g01820.html 46 | 105 | 106 HeptamerElement:GCGTTCG | HeptamerElement:GATATTT | HeptamerElement:AGATATT GCGTTCG | GATATTT | AGATATT 0.07 | 0.09 | 0.09 0.1663 0.3334 0.4777 0.1431 0.9694 0.6642
ATTED:At1g01840.html 51 | 52 | 53 | 54 | 71 | 72 | 73 | 74 HeptamerElement:GCCCAAA | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC GCCCAAA | GGCCCAA | AGGCCCA | AAGGCCC | GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC 0.06 | 0.08 | 0.10 | 0.07 | 0.07 | 0.07 | 0.09 | 0.07 -0.6670 -0.3184 -0.3992 -0.2377 -0.4957 -0.5334
ATTED:At1g01860.html 8 HeptamerElement:TCTTATC TCTTATC 0.08 -0.6444 -0.5953 -0.5921 -0.8649 -0.5092 -0.5769
ATTED:At1g01900.html 40 | 41 | 42 | 43 HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA TATATAT | ATATATA | TATATAT | ATATATA 0.10 | 0.10 | 0.10 | 0.10 -0.5928 -0.7569 -1.2986 -0.8712 -1.3464 -1.4660
ATTED:At1g01920.html 18 | 19 | 38 | 88 | 89 | 98 | 99 | 100 HeptamerElement:TAAACCC | HeptamerElement:TTAAACC | HeptamerElement:AAAACCC | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:GCCCATA | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA TAAACCC | TTAAACC | AAAACCC | AAGCCCA | AAAGCCC | GCCCATA | AGCCCAT | AAGCCCA 0.09 | 0.07 | 0.09 | 0.10 | 0.06 | 0.07 | 0.08 | 0.09 0.4134 -0.0959 0.1451 -0.0549 0.1913 -0.1146
ATTED:At1g01930.html 84 | 85 | 93 | 94 | 95 | 96 | 97 | 109 HeptamerElement:ATGGGCC | HeptamerElement:TATGGGC | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:TATTGGG | HeptamerElement:GCCGCCT ATGGGCC | TATGGGC | GGGCCTT | TGGGCCT | TTGGGCC | ATTGGGC | TATTGGG | GCCGCCT 0.08 | 0.06 | 0.06 | 0.10 | 0.09 | 0.09 | 0.06 | 0.07 -0.2201 -0.2949 -0.0162 -0.0981 -0.1708 -0.2349
ATTED:At1g01940.html 71 | 72 | 73 | 74 | 82 | 83 HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT GCCCAAT | GGCCCAA | AGGCCCA | AAGGCCC | GCCCATA | GGCCCAT 0.07 | 0.08 | 0.11 | 0.08 | 0.07 | 0.10 0.8347 0.3387 0.0988 0.2897 0.1509 0.0225
ATTED:At1g01950.html 62 | 114 HeptamerElement:CTCTCTT | HeptamerElement:AAAATAT CTCTCTT | AAAATAT 0.06 | 0.07 0.0848 -0.3268 -0.2402 -0.1948 -0.2978 -0.4024
ATTED:At1g01970.html 65 | 81 | 82 | 83 | 84 | 99 | 100 | 101 | 121 | 122 HeptamerElement:TCTCTAG | HeptamerElement:GCCCATA | HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:ATGGGCC | HeptamerElement:AATGGGC TCTCTAG | GCCCATA | GGCCCAT | AGGCCCA | AAGGCCC | GCCCAAT | GGCCCAA | AGGCCCA | ATGGGCC | AATGGGC 0.06 | 0.07 | 0.10 | 0.11 | 0.08 | 0.07 | 0.07 | 0.10 | 0.07 | 0.07 -1.7604 -1.4554 -1.3507 -1.6610 -1.5874 -1.7605
ATTED:At1g01990.html 61 | 85 | 86 | 87 | 98 | 147 | 148 HeptamerElement:CTCTCTT | HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:TGGGCTT | HeptamerElement:ATGGGCT CTCTCTT | CCCATTA | GCCCATT | AGCCCAT | TGGGCTT | TGGGCTT | ATGGGCT 0.06 | 0.07 | 0.10 | 0.09 | 0.09 | 0.06 | 0.06 -0.4865 -0.5086 -0.5065 -0.5725 -0.3607 -0.3823
ATTED:At1g02020.html 118 HeptamerElement:TGCCGAC TGCCGAC 0.08 -0.9883 -0.8890 -0.3715 -0.5072 -0.2080 -0.4609
ATTED:At1g02050.html 37 HeptamerElement:AATATCT AATATCT 0.11 -0.1406 -0.7832 -0.0632 -0.4136 0.2146 -0.3104
ATTED:At1g02060.html 36 | 68 | 69 | 70 | 80 | 81 | 96 | 114 | 115 | 116 | 117 HeptamerElement:AGGGTTT | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:TCTAGAA | HeptamerElement:GGGCCTA | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC AGGGTTT | TGGGCCT | TTGGGCC | ATTGGGC | GCCCATT | AGCCCAT | TCTAGAA | GGGCCTA | TGGGCCT | TTGGGCC | ATTGGGC 0.10 | 0.09 | 0.08 | 0.08 | 0.10 | 0.08 | 0.11 | 0.06 | 0.09 | 0.08 | 0.08 0.2757 -0.2164 0.3208 -0.2539 0.1111 -0.0620
ATTED:At1g02070.html 6 | 7 | 8 | 9 | 10 | 11 | 12 | 28 | 29 | 30 HeptamerElement:ATAAATA | HeptamerElement:TATAAAT | HeptamerElement:ATATAAA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ATATATA ATAAATA | TATAAAT | ATATAAA | TATATAA | ATATATA | TATATAT | ATATATA | ATATATA | TATATAT | ATATATA 0.09 | 0.10 | 0.09 | 0.11 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 | 0.10 -0.6893 -1.1248 -1.0076 -1.0058 -0.9591 -0.9635
ATTED:At1g02080.html 62 | 63 | 64 | 65 HeptamerElement:ACCCTAG | HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:AAAACCC ACCCTAG | AACCCTA | AAACCCT | AAAACCC 0.06 | 0.10 | 0.11 | 0.08 0.3107 -0.7318 -0.0069 -0.0885 0.1554 0.1199
ATTED:At1g02090.html 30 | 54 | 68 | 69 | 88 | 89 | 143 | 144 HeptamerElement:ATATAAA | HeptamerElement:GTCGGTC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:CGCGGTT | HeptamerElement:ACGCGGT ATATAAA | GTCGGTC | TCTAGAA | TTCTAGA | GCCCAAT | AGCCCAA | CGCGGTT | ACGCGGT 0.09 | 0.06 | 0.12 | 0.09 | 0.07 | 0.07 | 0.07 | 0.09 0.3510 0.5044 0.2851 0.2951 -0.0543 0.1263
ATTED:At1g02100.html 86 | 87 | 106 | 107 | 108 HeptamerElement:TTGGGCT | HeptamerElement:ATTGGGC | HeptamerElement:TCTAGAA | HeptamerElement:TTCTAGA | HeptamerElement:CTTCTAG TTGGGCT | ATTGGGC | TCTAGAA | TTCTAGA | CTTCTAG 0.07 | 0.08 | 0.10 | 0.10 | 0.08 0.6035 0.3673 0.7703 0.2992 0.8579 0.5622
ATTED:At1g02120.html 38 HeptamerElement:GGCCCAA GGCCCAA 0.07 0.1763 -0.1582 0.3488 0.0227 0.4647 0.2257
ATTED:At1g02130.html 45 | 46 | 47 | 72 | 73 | 74 HeptamerElement:GGCCCAA | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TGGGCCT | HeptamerElement:TTGGGCC | HeptamerElement:ATTGGGC GGCCCAA | AGGCCCA | AAGGCCC | TGGGCCT | TTGGGCC | ATTGGGC 0.07 | 0.10 | 0.07 | 0.09 | 0.08 | 0.08 0.3919 0.3577 0.3533 0.2057 0.3345 0.2487
ATTED:At1g02140.html 58 | 59 | 60 | 61 | 72 | 73 | 106 | 107 | 192 HeptamerElement:CCCATTA | HeptamerElement:GCCCATT | HeptamerElement:AGCCCAT | HeptamerElement:AAGCCCA | HeptamerElement:GCCCAAT | HeptamerElement:GGCCCAA | HeptamerElement:GGGCCTT | HeptamerElement:TGGGCCT | HeptamerElement:GTCGGCA CCCATTA | GCCCATT | AGCCCAT | AAGCCCA | GCCCAAT | GGCCCAA | GGGCCTT | TGGGCCT | GTCGGCA 0.06 | 0.09 | 0.07 | 0.08 | 0.07 | 0.08 | 0.07 | 0.10 | 0.06 0.1856 0.2406 0.1582 0.1489 0.2473 0.1123
ATTED:At1g02160.html 43 | 44 | 45 | 66 | 67 | 82 | 99 HeptamerElement:GGCCCAT | HeptamerElement:AGGCCCA | HeptamerElement:AAGGCCC | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:AAGGCCC | HeptamerElement:TTGGGCC GGCCCAT | AGGCCCA | AAGGCCC | TATATAA | ATATATA | AAGGCCC | TTGGGCC 0.09 | 0.10 | 0.07 | 0.10 | 0.08 | 0.08 | 0.09 0.1087 -0.2894 -0.3770 -0.3705 0.0543 -0.2719
ATTED:At1g02180.html 65 | 66 | 67 | 68 | 84 HeptamerElement:GCCCAAT | HeptamerElement:AGCCCAA | HeptamerElement:AAGCCCA | HeptamerElement:AAAGCCC | HeptamerElement:AGCCCAA GCCCAAT | AGCCCAA | AAGCCCA | AAAGCCC | AGCCCAA 0.07 | 0.07 | 0.09 | 0.06 | 0.07 -0.7676 -0.5924 -0.8964 -0.4529 -0.8442 -0.8017
ATTED:At1g02190.html 32 | 33 | 34 | 35 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:CTCTATA TATATAA | CTATATA | TCTATAT | CTCTATA 0.11 | 0.13 | 0.10 | 0.10 -1.8344 -2.0493 -1.9445 -1.8102 -1.9617 -1.9766
ATTED:At1g02205.html 31 | 32 | 43 | 44 | 67 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TATAAAC | HeptamerElement:ATATAAA | HeptamerElement:ATATCTA TATATAA | CTATATA | TATAAAC | ATATAAA | ATATCTA 0.11 | 0.13 | 0.07 | 0.08 | 0.06 -4.5390 -3.6903 -4.2145 -3.5285 -4.1905 -3.6649
ATTED:At1g02260.html 117 | 118 HeptamerElement:CGTGGCA | HeptamerElement:ACGTGGC CGTGGCA | ACGTGGC 0.08 | 0.09 0.1898 0.2032 0.2094 0.1752 0.0993 0.3295
ATTED:At1g02270.html 125 | 126 HeptamerElement:GATATTT | HeptamerElement:AGATATT GATATTT | AGATATT 0.09 | 0.09 0.0209 -0.1646 -0.3113 -0.1619 -0.2936 -0.2050
ATTED:At1g02280.html 26 HeptamerElement:GATAAGG GATAAGG 0.07 -0.9842 -1.4599 -0.9437 -1.5244 -1.0610 -1.5821
ATTED:At1g02310.html 25 | 34 | 35 | 36 | 131 HeptamerElement:CCACACA | HeptamerElement:TATATAA | HeptamerElement:ATATATA | HeptamerElement:TATATAT | HeptamerElement:ACGCGTT CCACACA | TATATAA | ATATATA | TATATAT | ACGCGTT 0.06 | 0.11 | 0.10 | 0.10 | 0.10 0.7598 0.9340 0.0691 0.7628 1.7013 2.1320
ATTED:At1g02330.html 38 | 53 | 55 | 127 | 128 | 147 HeptamerElement:GGCCCAT | HeptamerElement:TGGGCTT | HeptamerElement:AATGGGC | HeptamerElement:ATGGGCT | HeptamerElement:AATGGGC | HeptamerElement:TGGGCCT GGCCCAT | TGGGCTT | AATGGGC | ATGGGCT | AATGGGC | TGGGCCT 0.08 | 0.07 | 0.08 | 0.07 | 0.07 | 0.07 0.4115 0.0843 0.0999 0.2114 0.1280 0.0177
ATTED:At1g02340.html 26 HeptamerElement:CCACACA CCACACA 0.06 -1.3526 0.3038 1.2418 0.3495 2.2014 1.4100
ATTED:At1g02360.html 30 | 31 | 32 | 52 | 53 HeptamerElement:TATATAA | HeptamerElement:CTATATA | HeptamerElement:TCTATAT | HeptamerElement:ACGCGTT | HeptamerElement:AACGCGT TATATAA | CTATATA | TCTATAT | ACGCGTT | AACGCGT 0.11 | 0.13 | 0.10 | 0.10 | 0.07 2.1812 4.9033 4.7319 4.9313 4.3133 4.1763
ATTED:At1g02370.html 58 | 59 | 60 | 61 HeptamerElement:AACCCTA | HeptamerElement:AAACCCT | HeptamerElement:TAAACCC | HeptamerElement:TTAAACC AACCCTA | AAACCCT | TAAACCC | TTAAACC 0.11 | 0.12 | 0.08 | 0.06 0.1502 -0.1503 -0.0560 -0.2747 0.0749 -0.3802
ATTED:At1g02390.html 28 | 71 | 122 | 172 | 173 | 180 HeptamerElement:TATATAA | HeptamerElement:AAATATC | HeptamerElement:CATGCAA | HeptamerElement:ACGCGTA | HeptamerElement:GACGCGT | HeptamerElement:AAATATC TATATAA | AAATATC | CATGCAA | ACGCGTA | GACGCGT | AAATATC 0.11 | 0.14 | 0.07 | 0.10 | 0.06 | 0.07 0.3794 -0.2608 -0.7618 -0.6258 -0.6763 -0.2527
ATTED:At1g02400.html 137 HeptamerElement:AATAATT AATAATT 0.06 1.8454 2.2001 1.2197 1.7042 1.8169 2.1029
ATTED:At1g02410.html 37 | 45 | 46 | 110 | 146 HeptamerElement:TTGACTT | HeptamerElement:TTGACTT | HeptamerElement:TTTGACT | HeptamerElement:AATAATT | HeptamerElement:TGGGCTT TTGACTT | TTGACTT | TTTGACT | AATAATT | TGGGCTT 0.07 | 0.08 | 0.06 | 0.06 | 0.06 -0.4635 0.0756 -0.2269 -0.3352 -0.2911 -0.2499
※ 100行まで表示しています。